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Cluster: AG351_63_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_204892 k141_204892_38 53391 54743 - 3.A.5.1.1
NULL(UNKNOWN) k141_204892 k141_204892_39 54880 55026 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_204892 k141_204892_40 55004 57052 - 2.A.16.2.2
pfam k141_204892 k141_204892_41 57235 58959 - DHH | DHHA1 | RecJ_OB
CAZyme k141_204892 k141_204892_42 59279 60481 + GH33
Gene ID: k141_204892_38
Type: TC
Location: 53391 - 54743 (-)
Gene ID: k141_204892_39
Type:
Location: 54880 - 55026 (+)
Gene ID: k141_204892_40
Type: TC
Location: 55004 - 57052 (-)
Gene ID: k141_204892_41
Type: pfam
Location: 57235 - 58959 (-)
Gene ID: k141_204892_42
Type: CAZyme
Location: 59279 - 60481 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_204892_41 vegan > omnivore 1.05016 0.04449

🧭 Explore Read Mapping of CGC

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