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Cluster: AG351_63_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_345400 k141_345400_17 16804 19686 + PL8_2
pfam k141_345400 k141_345400_18 19753 21453 - PseudoU_synth_2
TF k141_345400 k141_345400_19 21457 24858 - HTH_AraC
TC k141_345400 k141_345400_20 25161 28133 + 1.B.14.6.1
TC k141_345400 k141_345400_21 28229 29812 + 8.A.46.1.1
pfam k141_345400 k141_345400_22 29828 31231 + SusE | DUF5111 | DUF5114
CAZyme k141_345400 k141_345400_23 31254 32309 + GH53
CAZyme k141_345400 k141_345400_24 32431 33537 + GH53
CAZyme k141_345400 k141_345400_25 33560 35947 + GH2
TF k141_345400 k141_345400_26 36599 37456 - HTH_AraC
pfam k141_345400 k141_345400_27 37646 38953 + OEP | OEP
TC k141_345400 k141_345400_28 39010 40038 + 8.A.1.1.2
Gene ID: k141_345400_17
Type: CAZyme
Location: 16804 - 19686 (+)
Gene ID: k141_345400_18
Type: pfam
Location: 19753 - 21453 (-)
Gene ID: k141_345400_19
Type: TF
Location: 21457 - 24858 (-)
Gene ID: k141_345400_20
Type: TC
Location: 25161 - 28133 (+)
Gene ID: k141_345400_21
Type: TC
Location: 28229 - 29812 (+)
Gene ID: k141_345400_22
Type: pfam
Location: 29828 - 31231 (+)
Gene ID: k141_345400_23
Type: CAZyme
Location: 31254 - 32309 (+)
Gene ID: k141_345400_24
Type: CAZyme
Location: 32431 - 33537 (+)
Gene ID: k141_345400_25
Type: CAZyme
Location: 33560 - 35947 (+)
Gene ID: k141_345400_26
Type: TF
Location: 36599 - 37456 (-)
Gene ID: k141_345400_27
Type: pfam
Location: 37646 - 38953 (+)
Gene ID: k141_345400_28
Type: TC
Location: 39010 - 40038 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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