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Cluster: AG350_bin.74_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_16043 k141_16043_6 6853 7683 - 3.A.1.132.3
pfam k141_16043 k141_16043_7 7942 10821 + UvrA_DNA-bind | UvrA_inter
pfam k141_16043 k141_16043_8 10956 11456 + tRNA_edit
TC k141_16043 k141_16043_9 11460 13769 + 2.A.66.4.4
pfam k141_16043 k141_16043_10 13776 15716 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC k141_16043 k141_16043_11 16082 17695 + 3.A.1.5.27
TC k141_16043 k141_16043_12 17853 18809 + 3.A.1.5.38
TC k141_16043 k141_16043_13 18813 20828 + 3.A.1.5.25
TC k141_16043 k141_16043_14 20829 21656 + 3.A.1.5.27
CAZyme k141_16043 k141_16043_15 21788 22714 + CE7
Gene ID: k141_16043_6
Type: TC
Location: 6853 - 7683 (-)
Gene ID: k141_16043_7
Type: pfam
Location: 7942 - 10821 (+)
Gene ID: k141_16043_8
Type: pfam
Location: 10956 - 11456 (+)
Gene ID: k141_16043_9
Type: TC
Location: 11460 - 13769 (+)
Gene ID: k141_16043_10
Type: pfam
Location: 13776 - 15716 (+)
Gene ID: k141_16043_11
Type: TC
Location: 16082 - 17695 (+)
Gene ID: k141_16043_12
Type: TC
Location: 17853 - 18809 (+)
Gene ID: k141_16043_13
Type: TC
Location: 18813 - 20828 (+)
Gene ID: k141_16043_14
Type: TC
Location: 20829 - 21656 (+)
Gene ID: k141_16043_15
Type: CAZyme
Location: 21788 - 22714 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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