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Cluster: AG350_bin.74_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_386665 k141_386665_23 28301 29470 - CE9
STP k141_386665 k141_386665_24 29588 30754 - SIS | SIS
TF k141_386665 k141_386665_25 30869 31600 - GntR
TC k141_386665 k141_386665_26 31785 32867 - 4.A.6.1.4
TC k141_386665 k141_386665_27 32857 33657 - 4.A.6.1.4
TC k141_386665 k141_386665_28 33748 34230 - 4.A.6.1.4
pfam k141_386665 k141_386665_29 34267 34548 - YajC
TC k141_386665 k141_386665_30 34548 34991 - 4.A.6.1.16
Gene ID: k141_386665_23
Type: CAZyme
Location: 28301 - 29470 (-)
Gene ID: k141_386665_24
Type: STP
Location: 29588 - 30754 (-)
Gene ID: k141_386665_25
Type: TF
Location: 30869 - 31600 (-)
Gene ID: k141_386665_26
Type: TC
Location: 31785 - 32867 (-)
Gene ID: k141_386665_27
Type: TC
Location: 32857 - 33657 (-)
Gene ID: k141_386665_28
Type: TC
Location: 33748 - 34230 (-)
Gene ID: k141_386665_29
Type: pfam
Location: 34267 - 34548 (-)
Gene ID: k141_386665_30
Type: TC
Location: 34548 - 34991 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_386665_29 vegan > omnivore 1.08577 0.00701

🧭 Explore Read Mapping of CGC

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