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Cluster: AG350_bin.74_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_386665 k141_386665_1 209 547 - 4.A.3.1.2
TF k141_386665 k141_386665_2 761 1765 - LacI
TC k141_386665 k141_386665_3 2123 3886 + 4.A.3.1.1
CAZyme k141_386665 k141_386665_4 3953 5392 + GH1
TF k141_386665 k141_386665_5 5663 6700 - LacI
CAZyme k141_386665 k141_386665_6 7042 8484 + GH1
TC k141_386665 k141_386665_7 8661 10421 + 4.A.3.1.1
TF k141_386665 k141_386665_8 10754 11764 - LacI
TC k141_386665 k141_386665_9 12041 13819 + 4.A.3.1.1
CAZyme k141_386665 k141_386665_10 13895 15316 + GH1
pfam k141_386665 k141_386665_11 15684 16916 + Fic
STP k141_386665 k141_386665_12 16913 17296 - DeoRC
TC k141_386665 k141_386665_13 17459 19153 - 4.A.3.1.1
Gene ID: k141_386665_1
Type: TC
Location: 209 - 547 (-)
Gene ID: k141_386665_2
Type: TF
Location: 761 - 1765 (-)
Gene ID: k141_386665_3
Type: TC
Location: 2123 - 3886 (+)
Gene ID: k141_386665_4
Type: CAZyme
Location: 3953 - 5392 (+)
Gene ID: k141_386665_5
Type: TF
Location: 5663 - 6700 (-)
Gene ID: k141_386665_6
Type: CAZyme
Location: 7042 - 8484 (+)
Gene ID: k141_386665_7
Type: TC
Location: 8661 - 10421 (+)
Gene ID: k141_386665_8
Type: TF
Location: 10754 - 11764 (-)
Gene ID: k141_386665_9
Type: TC
Location: 12041 - 13819 (+)
Gene ID: k141_386665_10
Type: CAZyme
Location: 13895 - 15316 (+)
Gene ID: k141_386665_11
Type: pfam
Location: 15684 - 16916 (+)
Gene ID: k141_386665_12
Type: STP
Location: 16913 - 17296 (-)
Gene ID: k141_386665_13
Type: TC
Location: 17459 - 19153 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_386665_5 vegetarian > omnivore 1.07066 0.02242
k141_386665_12 vegetarian > omnivore 1.07670 0.02431

🧭 Explore Read Mapping of CGC

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