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Cluster: AG349_bin.17_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_264840 k141_264840_31 44702 46354 - GH110
pfam k141_264840 k141_264840_32 46351 46986 - Lipase_GDSL | Lipase_GDSL_2
pfam k141_264840 k141_264840_33 46991 47662 - Lipase_GDSL | Lipase_GDSL_2
CAZyme k141_264840 k141_264840_34 47659 49155 - GH43_28
pfam k141_264840 k141_264840_35 49169 49741 - LacAB_rpiB
TF k141_264840 k141_264840_36 49752 51860 - HTH_AraC
TC k141_264840 k141_264840_37 52085 53035 + 3.A.1.1.10
TC k141_264840 k141_264840_38 53052 53957 + 3.A.1.1.29
STP k141_264840 k141_264840_39 54076 55722 + SBP_bac_1
CAZyme k141_264840 k141_264840_40 55794 58262 + CBM67 | GH78
Gene ID: k141_264840_31
Type: CAZyme
Location: 44702 - 46354 (-)
Gene ID: k141_264840_32
Type: pfam
Location: 46351 - 46986 (-)
Gene ID: k141_264840_33
Type: pfam
Location: 46991 - 47662 (-)
Gene ID: k141_264840_34
Type: CAZyme
Location: 47659 - 49155 (-)
Gene ID: k141_264840_35
Type: pfam
Location: 49169 - 49741 (-)
Gene ID: k141_264840_36
Type: TF
Location: 49752 - 51860 (-)
Gene ID: k141_264840_37
Type: TC
Location: 52085 - 53035 (+)
Gene ID: k141_264840_38
Type: TC
Location: 53052 - 53957 (+)
Gene ID: k141_264840_39
Type: STP
Location: 54076 - 55722 (+)
Gene ID: k141_264840_40
Type: CAZyme
Location: 55794 - 58262 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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