Cluster: AG349_bin.17_CGC44
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 3
- Substrate:
- Genome ID: AG349_bin.17
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_89401 | k141_89401_2 | 1155 | 2534 | + | 2.A.50.2.1 |
| pfam | k141_89401 | k141_89401_3 | 2556 | 3671 | + | DHHW | ALGX |
| TC | k141_89401 | k141_89401_4 | 3841 | 6453 | + | 3.A.9.1.2 |
| STP | k141_89401 | k141_89401_5 | 6532 | 6744 | + | HMA |
| CAZyme | k141_89401 | k141_89401_6 | 7387 | 8760 | + | GH20 |
| STP | k141_89401 | k141_89401_7 | 8850 | 10496 | - | SBP_bac_1 |
| TC | k141_89401 | k141_89401_8 | 10565 | 11464 | - | 3.A.1.1.10 |
| TC | k141_89401 | k141_89401_9 | 11477 | 12427 | - | 3.A.1.1.10 |
| CAZyme | k141_89401 | k141_89401_10 | 12716 | 19576 | - | CBM9 | CBM9 | GH123 |
| TF | k141_89401 | k141_89401_11 | 19842 | 21251 | - | HTH_AraC | HTH_AraC |
| TC | k141_89401 | k141_89401_12 | 21265 | 23127 | - | 8.A.59.2.1 |
| TC | k141_89401 | k141_89401_13 | 23382 | 24332 | + | 3.A.1.1.10 |
| TC | k141_89401 | k141_89401_14 | 24349 | 25224 | + | 3.A.1.1.10 |
| STP | k141_89401 | k141_89401_15 | 25284 | 26912 | + | SBP_bac_1 |
| CAZyme | k141_89401 | k141_89401_16 | 27104 | 29038 | + | GH20 |
Gene ID: k141_89401_2
Type: TC
Location: 1155 - 2534 (+)
Type: TC
Location: 1155 - 2534 (+)
Gene ID: k141_89401_3
Type: pfam
Location: 2556 - 3671 (+)
Type: pfam
Location: 2556 - 3671 (+)
Gene ID: k141_89401_4
Type: TC
Location: 3841 - 6453 (+)
Type: TC
Location: 3841 - 6453 (+)
Gene ID: k141_89401_5
Type: STP
Location: 6532 - 6744 (+)
Type: STP
Location: 6532 - 6744 (+)
Gene ID: k141_89401_6
Type: CAZyme
Location: 7387 - 8760 (+)
Type: CAZyme
Location: 7387 - 8760 (+)
Gene ID: k141_89401_7
Type: STP
Location: 8850 - 10496 (-)
Type: STP
Location: 8850 - 10496 (-)
Gene ID: k141_89401_8
Type: TC
Location: 10565 - 11464 (-)
Type: TC
Location: 10565 - 11464 (-)
Gene ID: k141_89401_9
Type: TC
Location: 11477 - 12427 (-)
Type: TC
Location: 11477 - 12427 (-)
Gene ID: k141_89401_10
Type: CAZyme
Location: 12716 - 19576 (-)
Type: CAZyme
Location: 12716 - 19576 (-)
Gene ID: k141_89401_11
Type: TF
Location: 19842 - 21251 (-)
Type: TF
Location: 19842 - 21251 (-)
Gene ID: k141_89401_12
Type: TC
Location: 21265 - 23127 (-)
Type: TC
Location: 21265 - 23127 (-)
Gene ID: k141_89401_13
Type: TC
Location: 23382 - 24332 (+)
Type: TC
Location: 23382 - 24332 (+)
Gene ID: k141_89401_14
Type: TC
Location: 24349 - 25224 (+)
Type: TC
Location: 24349 - 25224 (+)
Gene ID: k141_89401_15
Type: STP
Location: 25284 - 26912 (+)
Type: STP
Location: 25284 - 26912 (+)
Gene ID: k141_89401_16
Type: CAZyme
Location: 27104 - 29038 (+)
Type: CAZyme
Location: 27104 - 29038 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Merdivicinus
Species
Merdivicinus sp934539585
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_89401_10 | vegetarian > vegan | 1.23484 | 0.00578 |
| k141_89401_11 | vegetarian > vegan | 1.52468 | 0.00578 |
| k141_89401_13 | vegetarian > vegan | 1.51056 | 0.00578 |
| k141_89401_14 | vegetarian > vegan | 1.62852 | 0.00578 |
| k141_89401_16 | vegetarian > vegan | 1.73373 | 0.00578 |