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Cluster: AG349_bin.17_CGC35

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_87881 k141_87881_63 42903 44204 + GH29
TF k141_87881 k141_87881_64 44534 46033 + HTH_AraC
CAZyme k141_87881 k141_87881_65 46256 50845 + CBM32 | CBM32 | GH31
CAZyme k141_87881 k141_87881_66 50869 55014 + CBM32 | CBM32 | CBM32 | GH20
TC k141_87881 k141_87881_67 55041 56774 + 9.B.33.1.1
pfam k141_87881 k141_87881_68 56918 57868 + Acetyltransf_9
TC k141_87881 k141_87881_69 57902 58855 + 3.A.1.1.10
TC k141_87881 k141_87881_70 58875 59759 + 3.A.1.1.29
Gene ID: k141_87881_63
Type: CAZyme
Location: 42903 - 44204 (+)
Gene ID: k141_87881_64
Type: TF
Location: 44534 - 46033 (+)
Gene ID: k141_87881_65
Type: CAZyme
Location: 46256 - 50845 (+)
Gene ID: k141_87881_66
Type: CAZyme
Location: 50869 - 55014 (+)
Gene ID: k141_87881_67
Type: TC
Location: 55041 - 56774 (+)
Gene ID: k141_87881_68
Type: pfam
Location: 56918 - 57868 (+)
Gene ID: k141_87881_69
Type: TC
Location: 57902 - 58855 (+)
Gene ID: k141_87881_70
Type: TC
Location: 58875 - 59759 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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