Cluster: AG344_12_CGC30
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 3
- Substrate:
- Genome ID: AG344_12
- CGC Family ID: CGCFAM_07138
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_86010 | k141_86010_12 | 11982 | 13718 | + | 3.A.2.3.3 |
| TC | k141_86010 | k141_86010_13 | 13711 | 15012 | + | 3.A.2.3.3 |
| TC | k141_86010 | k141_86010_14 | 15030 | 15638 | + | 3.A.2.3.3 |
| TC | k141_86010 | k141_86010_15 | 15635 | 17485 | + | 3.A.2.3.3 |
| TC | k141_86010 | k141_86010_16 | 17518 | 18063 | + | 3.A.2.3.3 |
| pfam | k141_86010 | k141_86010_17 | 18139 | 19059 | + | Epimerase | Epimerase |
| NULL(UNKNOWN) | k141_86010 | k141_86010_18 | 19102 | 20310 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_86010 | k141_86010_19 | 20329 | 22374 | - | GH151 |
| TF | k141_86010 | k141_86010_20 | 22494 | 23405 | + | HTH_AraC | HTH_AraC |
| CAZyme | k141_86010 | k141_86010_21 | 23515 | 24312 | - | CBM9 |
| TF | k141_86010 | k141_86010_22 | 24532 | 25539 | + | LacI |
| pfam | k141_86010 | k141_86010_23 | 25586 | 26356 | + | SBP_bac_10 | N_methyl |
| CAZyme | k141_86010 | k141_86010_24 | 26386 | 28611 | + | GH163 |
| NULL(UNKNOWN) | k141_86010 | k141_86010_25 | 28654 | 29058 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | k141_86010 | k141_86010_26 | 29537 | 30361 | - | Abhydrolase_3 | BD-FAE |
| TC | k141_86010 | k141_86010_27 | 30378 | 31643 | - | 2.A.1.54.1 |
Gene ID: k141_86010_12
Type: TC
Location: 11982 - 13718 (+)
Type: TC
Location: 11982 - 13718 (+)
Gene ID: k141_86010_13
Type: TC
Location: 13711 - 15012 (+)
Type: TC
Location: 13711 - 15012 (+)
Gene ID: k141_86010_14
Type: TC
Location: 15030 - 15638 (+)
Type: TC
Location: 15030 - 15638 (+)
Gene ID: k141_86010_15
Type: TC
Location: 15635 - 17485 (+)
Type: TC
Location: 15635 - 17485 (+)
Gene ID: k141_86010_16
Type: TC
Location: 17518 - 18063 (+)
Type: TC
Location: 17518 - 18063 (+)
Gene ID: k141_86010_17
Type: pfam
Location: 18139 - 19059 (+)
Type: pfam
Location: 18139 - 19059 (+)
Gene ID: k141_86010_18
Type:
Location: 19102 - 20310 (-)
Type:
Location: 19102 - 20310 (-)
Gene ID: k141_86010_19
Type: CAZyme
Location: 20329 - 22374 (-)
Type: CAZyme
Location: 20329 - 22374 (-)
Gene ID: k141_86010_20
Type: TF
Location: 22494 - 23405 (+)
Type: TF
Location: 22494 - 23405 (+)
Gene ID: k141_86010_21
Type: CAZyme
Location: 23515 - 24312 (-)
Type: CAZyme
Location: 23515 - 24312 (-)
Gene ID: k141_86010_22
Type: TF
Location: 24532 - 25539 (+)
Type: TF
Location: 24532 - 25539 (+)
Gene ID: k141_86010_23
Type: pfam
Location: 25586 - 26356 (+)
Type: pfam
Location: 25586 - 26356 (+)
Gene ID: k141_86010_24
Type: CAZyme
Location: 26386 - 28611 (+)
Type: CAZyme
Location: 26386 - 28611 (+)
Gene ID: k141_86010_25
Type:
Location: 28654 - 29058 (+)
Type:
Location: 28654 - 29058 (+)
Gene ID: k141_86010_26
Type: pfam
Location: 29537 - 30361 (-)
Type: pfam
Location: 29537 - 30361 (-)
Gene ID: k141_86010_27
Type: TC
Location: 30378 - 31643 (-)
Type: TC
Location: 30378 - 31643 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Lentisphaeria
Order
Victivallales
Family
UBA1829
Genus
UBA11452
Species
UBA11452 sp003526375
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.