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Cluster: AG344_12_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_342086 k141_342086_5 3761 5404 + GH2
STP k141_342086 k141_342086_6 5581 6243 + TetR_N
pfam k141_342086 k141_342086_7 6248 7393 + HlyD_3
TC k141_342086 k141_342086_8 7380 10439 + 2.A.6.2.37
pfam k141_342086 k141_342086_9 10590 11405 - OMPdecase
pfam k141_342086 k141_342086_10 11419 12123 - DUF3047
CAZyme k141_342086 k141_342086_11 12142 12750 - GH23
Gene ID: k141_342086_5
Type: CAZyme
Location: 3761 - 5404 (+)
Gene ID: k141_342086_6
Type: STP
Location: 5581 - 6243 (+)
Gene ID: k141_342086_7
Type: pfam
Location: 6248 - 7393 (+)
Gene ID: k141_342086_8
Type: TC
Location: 7380 - 10439 (+)
Gene ID: k141_342086_9
Type: pfam
Location: 10590 - 11405 (-)
Gene ID: k141_342086_10
Type: pfam
Location: 11419 - 12123 (-)
Gene ID: k141_342086_11
Type: CAZyme
Location: 12142 - 12750 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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