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Cluster: AG344_12_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_174820 k141_174820_3 2625 3758 - 9.B.146.1.4
TF k141_174820 k141_174820_4 3879 4841 + 0040266
CAZyme k141_174820 k141_174820_5 4895 7309 - GH123
NULL(UNKNOWN) k141_174820 k141_174820_6 7357 8370 - NULL(UNKNOWN)
[View Structural Homologs]
TF k141_174820 k141_174820_7 8398 9525 - GntR
TC k141_174820 k141_174820_8 9658 10779 - 3.A.1.105.4
TC k141_174820 k141_174820_9 10782 11891 - 3.A.1.105.4
TC k141_174820 k141_174820_10 11888 13639 - 3.A.1.105.4
TC k141_174820 k141_174820_11 13644 14639 - 3.A.1.105.4
NULL(UNKNOWN) k141_174820 k141_174820_12 14664 15122 - NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_174820 k141_174820_13 15340 15876 + Rubrerythrin | RUBY_RBDX
CAZyme k141_174820 k141_174820_14 16004 18475 - GH163
Gene ID: k141_174820_3
Type: TC
Location: 2625 - 3758 (-)
Gene ID: k141_174820_4
Type: TF
Location: 3879 - 4841 (+)
Gene ID: k141_174820_5
Type: CAZyme
Location: 4895 - 7309 (-)
Gene ID: k141_174820_6
Type:
Location: 7357 - 8370 (-)
Gene ID: k141_174820_7
Type: TF
Location: 8398 - 9525 (-)
Gene ID: k141_174820_8
Type: TC
Location: 9658 - 10779 (-)
Gene ID: k141_174820_9
Type: TC
Location: 10782 - 11891 (-)
Gene ID: k141_174820_10
Type: TC
Location: 11888 - 13639 (-)
Gene ID: k141_174820_11
Type: TC
Location: 13644 - 14639 (-)
Gene ID: k141_174820_12
Type:
Location: 14664 - 15122 (-)
Gene ID: k141_174820_13
Type: pfam
Location: 15340 - 15876 (+)
Gene ID: k141_174820_14
Type: CAZyme
Location: 16004 - 18475 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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