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Cluster: AG344_12_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_340705 k141_340705_25 28303 29676 - 2.A.2.3.5
pfam k141_340705 k141_340705_26 29673 30293 - SBP_bac_10
CAZyme k141_340705 k141_340705_27 31008 32357 - GH13
STP k141_340705 k141_340705_28 33014 33769 - HTH_IclR | IclR
CAZyme k141_340705 k141_340705_29 33954 36287 + GH89
Gene ID: k141_340705_25
Type: TC
Location: 28303 - 29676 (-)
Gene ID: k141_340705_26
Type: pfam
Location: 29673 - 30293 (-)
Gene ID: k141_340705_27
Type: CAZyme
Location: 31008 - 32357 (-)
Gene ID: k141_340705_28
Type: STP
Location: 33014 - 33769 (-)
Gene ID: k141_340705_29
Type: CAZyme
Location: 33954 - 36287 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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