Cluster: AG342_bin.66_CGC2
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 1
- Substrate:
- Genome ID: AG342_bin.66
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_25959 | k141_25959_37 | 57903 | 59147 | - | GT4 |
| pfam | k141_25959 | k141_25959_38 | 59161 | 59925 | - | BcrAD_BadFG |
| pfam | k141_25959 | k141_25959_39 | 59977 | 61140 | - | HGD-D |
| TC | k141_25959 | k141_25959_40 | 61218 | 62003 | - | 3.A.1.5.36 |
| TC | k141_25959 | k141_25959_41 | 61990 | 62988 | - | 3.A.1.5.35 |
| TC | k141_25959 | k141_25959_42 | 62992 | 63819 | - | 3.A.1.5.39 |
| TC | k141_25959 | k141_25959_43 | 63819 | 64772 | - | 3.A.1.5.11 |
| TC | k141_25959 | k141_25959_44 | 64859 | 66469 | - | 3.A.1.5.11 |
| pfam | k141_25959 | k141_25959_45 | 66654 | 67937 | - | HGD-D |
| TC | k141_25959 | k141_25959_46 | 68388 | 69458 | - | 3.A.1.1.3 |
| TC | k141_25959 | k141_25959_47 | 69462 | 70943 | - | 3.A.1.8.1 |
Gene ID: k141_25959_37
Type: CAZyme
Location: 57903 - 59147 (-)
Type: CAZyme
Location: 57903 - 59147 (-)
Gene ID: k141_25959_38
Type: pfam
Location: 59161 - 59925 (-)
Type: pfam
Location: 59161 - 59925 (-)
Gene ID: k141_25959_39
Type: pfam
Location: 59977 - 61140 (-)
Type: pfam
Location: 59977 - 61140 (-)
Gene ID: k141_25959_40
Type: TC
Location: 61218 - 62003 (-)
Type: TC
Location: 61218 - 62003 (-)
Gene ID: k141_25959_41
Type: TC
Location: 61990 - 62988 (-)
Type: TC
Location: 61990 - 62988 (-)
Gene ID: k141_25959_42
Type: TC
Location: 62992 - 63819 (-)
Type: TC
Location: 62992 - 63819 (-)
Gene ID: k141_25959_43
Type: TC
Location: 63819 - 64772 (-)
Type: TC
Location: 63819 - 64772 (-)
Gene ID: k141_25959_44
Type: TC
Location: 64859 - 66469 (-)
Type: TC
Location: 64859 - 66469 (-)
Gene ID: k141_25959_45
Type: pfam
Location: 66654 - 67937 (-)
Type: pfam
Location: 66654 - 67937 (-)
Gene ID: k141_25959_46
Type: TC
Location: 68388 - 69458 (-)
Type: TC
Location: 68388 - 69458 (-)
Gene ID: k141_25959_47
Type: TC
Location: 69462 - 70943 (-)
Type: TC
Location: 69462 - 70943 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_25959_40 | vegan > omnivore | 2.57432 | 0.01560 |
| k141_25959_41 | vegan > omnivore | 1.27147 | 0.01560 |
| k141_25959_42 | vegan > omnivore | 2.80948 | 0.01560 |
| k141_25959_43 | vegan > omnivore | 2.57925 | 0.01560 |
| k141_25959_44 | vegan > omnivore | 2.88375 | 0.01560 |