Cluster: AG342_bin.66_CGC13
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: AG342_bin.66
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_120773 | k141_120773_51 | 52214 | 53140 | - | CE7 |
| TC | k141_120773 | k141_120773_52 | 53272 | 54099 | - | 3.A.1.5.27 |
| TC | k141_120773 | k141_120773_53 | 54100 | 56115 | - | 3.A.1.5.25 |
| TC | k141_120773 | k141_120773_54 | 56119 | 57075 | - | 3.A.1.5.38 |
| TC | k141_120773 | k141_120773_55 | 57233 | 58846 | - | 3.A.1.5.27 |
| pfam | k141_120773 | k141_120773_56 | 59212 | 61152 | - | GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH |
| TC | k141_120773 | k141_120773_57 | 61159 | 62841 | - | 2.A.66.4.4 |
Gene ID: k141_120773_51
Type: CAZyme
Location: 52214 - 53140 (-)
Type: CAZyme
Location: 52214 - 53140 (-)
Gene ID: k141_120773_52
Type: TC
Location: 53272 - 54099 (-)
Type: TC
Location: 53272 - 54099 (-)
Gene ID: k141_120773_53
Type: TC
Location: 54100 - 56115 (-)
Type: TC
Location: 54100 - 56115 (-)
Gene ID: k141_120773_54
Type: TC
Location: 56119 - 57075 (-)
Type: TC
Location: 56119 - 57075 (-)
Gene ID: k141_120773_55
Type: TC
Location: 57233 - 58846 (-)
Type: TC
Location: 57233 - 58846 (-)
Gene ID: k141_120773_56
Type: pfam
Location: 59212 - 61152 (-)
Type: pfam
Location: 59212 - 61152 (-)
Gene ID: k141_120773_57
Type: TC
Location: 61159 - 62841 (-)
Type: TC
Location: 61159 - 62841 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.