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Cluster: AG340_maxbin.016_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_106303 k141_106303_114 133866 134204 - 4.A.3.1.2
TF k141_106303 k141_106303_115 134419 135423 - LacI
TC k141_106303 k141_106303_116 135781 137553 + 4.A.3.1.1
CAZyme k141_106303 k141_106303_117 137624 139063 + GH1
TF k141_106303 k141_106303_118 139403 140440 - LacI
CAZyme k141_106303 k141_106303_119 140782 142224 + GH1
TC k141_106303 k141_106303_120 142401 144161 + 4.A.3.1.1
TF k141_106303 k141_106303_121 144496 145506 - LacI
TC k141_106303 k141_106303_122 145782 147560 + 4.A.3.1.1
CAZyme k141_106303 k141_106303_123 147637 149058 + GH1
pfam k141_106303 k141_106303_124 149425 150657 + Fic
STP k141_106303 k141_106303_125 150711 151034 - DeoRC
TC k141_106303 k141_106303_126 151197 152891 - 4.A.3.1.1
Gene ID: k141_106303_114
Type: TC
Location: 133866 - 134204 (-)
Gene ID: k141_106303_115
Type: TF
Location: 134419 - 135423 (-)
Gene ID: k141_106303_116
Type: TC
Location: 135781 - 137553 (+)
Gene ID: k141_106303_117
Type: CAZyme
Location: 137624 - 139063 (+)
Gene ID: k141_106303_118
Type: TF
Location: 139403 - 140440 (-)
Gene ID: k141_106303_119
Type: CAZyme
Location: 140782 - 142224 (+)
Gene ID: k141_106303_120
Type: TC
Location: 142401 - 144161 (+)
Gene ID: k141_106303_121
Type: TF
Location: 144496 - 145506 (-)
Gene ID: k141_106303_122
Type: TC
Location: 145782 - 147560 (+)
Gene ID: k141_106303_123
Type: CAZyme
Location: 147637 - 149058 (+)
Gene ID: k141_106303_124
Type: pfam
Location: 149425 - 150657 (+)
Gene ID: k141_106303_125
Type: STP
Location: 150711 - 151034 (-)
Gene ID: k141_106303_126
Type: TC
Location: 151197 - 152891 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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