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Cluster: AG334_bin.23_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_196104 k141_196104_11 10789 11127 - 4.A.3.1.2
TF k141_196104 k141_196104_12 11341 12345 - LacI
TC k141_196104 k141_196104_13 12702 14477 + 4.A.3.1.1
CAZyme k141_196104 k141_196104_14 14544 15983 + GH1
TF k141_196104 k141_196104_15 16245 17282 - LacI
CAZyme k141_196104 k141_196104_16 17624 19066 + GH1
TC k141_196104 k141_196104_17 19243 21003 + 4.A.3.1.1
TF k141_196104 k141_196104_18 21338 22339 - LacI
TC k141_196104 k141_196104_19 22624 24402 + 4.A.3.1.1
CAZyme k141_196104 k141_196104_20 24479 25900 + GH1
TF k141_196104 k141_196104_21 26095 26859 - HTH_DeoR
sulfatase k141_196104 k141_196104_22 27066 28118 + S1_4
TC k141_196104 k141_196104_23 28444 28926 - 4.A.6.1.5
Gene ID: k141_196104_11
Type: TC
Location: 10789 - 11127 (-)
Gene ID: k141_196104_12
Type: TF
Location: 11341 - 12345 (-)
Gene ID: k141_196104_13
Type: TC
Location: 12702 - 14477 (+)
Gene ID: k141_196104_14
Type: CAZyme
Location: 14544 - 15983 (+)
Gene ID: k141_196104_15
Type: TF
Location: 16245 - 17282 (-)
Gene ID: k141_196104_16
Type: CAZyme
Location: 17624 - 19066 (+)
Gene ID: k141_196104_17
Type: TC
Location: 19243 - 21003 (+)
Gene ID: k141_196104_18
Type: TF
Location: 21338 - 22339 (-)
Gene ID: k141_196104_19
Type: TC
Location: 22624 - 24402 (+)
Gene ID: k141_196104_20
Type: CAZyme
Location: 24479 - 25900 (+)
Gene ID: k141_196104_21
Type: TF
Location: 26095 - 26859 (-)
Gene ID: k141_196104_22
Type: sulfatase
Location: 27066 - 28118 (+)
Gene ID: k141_196104_23
Type: TC
Location: 28444 - 28926 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_196104_15 vegetarian > omnivore 1.02200 0.02695

🧭 Explore Read Mapping of CGC

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