Cluster: AG334_bin.23_CGC15
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 1
- Substrate:
- Genome ID: AG334_bin.23
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_260481 | k141_260481_7 | 17989 | 19233 | - | GT4 |
| pfam | k141_260481 | k141_260481_8 | 19247 | 20011 | - | BcrAD_BadFG |
| pfam | k141_260481 | k141_260481_9 | 20063 | 21226 | - | HGD-D |
| TC | k141_260481 | k141_260481_10 | 21304 | 22089 | - | 3.A.1.5.36 |
| TC | k141_260481 | k141_260481_11 | 22076 | 23074 | - | 3.A.1.5.35 |
| TC | k141_260481 | k141_260481_12 | 23078 | 23905 | - | 3.A.1.5.39 |
| TC | k141_260481 | k141_260481_13 | 23905 | 24858 | - | 3.A.1.5.11 |
| TC | k141_260481 | k141_260481_14 | 24945 | 26555 | - | 3.A.1.5.11 |
| pfam | k141_260481 | k141_260481_15 | 26740 | 28023 | - | HGD-D |
| TC | k141_260481 | k141_260481_16 | 28474 | 29544 | - | 3.A.1.1.3 |
| TC | k141_260481 | k141_260481_17 | 29548 | 31029 | - | 3.A.1.8.1 |
Gene ID: k141_260481_7
Type: CAZyme
Location: 17989 - 19233 (-)
Type: CAZyme
Location: 17989 - 19233 (-)
Gene ID: k141_260481_8
Type: pfam
Location: 19247 - 20011 (-)
Type: pfam
Location: 19247 - 20011 (-)
Gene ID: k141_260481_9
Type: pfam
Location: 20063 - 21226 (-)
Type: pfam
Location: 20063 - 21226 (-)
Gene ID: k141_260481_10
Type: TC
Location: 21304 - 22089 (-)
Type: TC
Location: 21304 - 22089 (-)
Gene ID: k141_260481_11
Type: TC
Location: 22076 - 23074 (-)
Type: TC
Location: 22076 - 23074 (-)
Gene ID: k141_260481_12
Type: TC
Location: 23078 - 23905 (-)
Type: TC
Location: 23078 - 23905 (-)
Gene ID: k141_260481_13
Type: TC
Location: 23905 - 24858 (-)
Type: TC
Location: 23905 - 24858 (-)
Gene ID: k141_260481_14
Type: TC
Location: 24945 - 26555 (-)
Type: TC
Location: 24945 - 26555 (-)
Gene ID: k141_260481_15
Type: pfam
Location: 26740 - 28023 (-)
Type: pfam
Location: 26740 - 28023 (-)
Gene ID: k141_260481_16
Type: TC
Location: 28474 - 29544 (-)
Type: TC
Location: 28474 - 29544 (-)
Gene ID: k141_260481_17
Type: TC
Location: 29548 - 31029 (-)
Type: TC
Location: 29548 - 31029 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_260481_10 | vegan > omnivore | 2.35893 | 0.00290 |
| k141_260481_12 | vegan > omnivore | 2.46580 | 0.00290 |
| k141_260481_13 | vegan > omnivore | 2.21362 | 0.00290 |
| k141_260481_14 | vegan > omnivore | 2.64070 | 0.00290 |