dbCAN Logo

Cluster: AG331_25_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_276965 k141_276965_11 13100 14212 - GT28
TC k141_276965 k141_276965_12 14209 15417 - 2.A.103.1.1
pfam k141_276965 k141_276965_13 15411 16856 - Mur_ligase_C | Mur_ligase_M | MurD-like_N
TC k141_276965 k141_276965_14 16912 18066 - 9.B.146.1.6
Gene ID: k141_276965_11
Type: CAZyme
Location: 13100 - 14212 (-)
Gene ID: k141_276965_12
Type: TC
Location: 14209 - 15417 (-)
Gene ID: k141_276965_13
Type: pfam
Location: 15411 - 16856 (-)
Gene ID: k141_276965_14
Type: TC
Location: 16912 - 18066 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_276965_11 vegan > omnivore 1.96077 0.01276
k141_276965_11 vegetarian > omnivore 1.36896 0.01067
k141_276965_12 vegan > omnivore 1.31384 0.01276
k141_276965_12 vegetarian > omnivore 1.68670 0.01067

🧭 Explore Read Mapping of CGC

← Back to Cluster List