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Cluster: AG331_25_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_50273 k141_50273_72 62338 63675 - 2.A.22.5.3
TC k141_50273 k141_50273_73 63789 65126 - 2.A.22.5.3
TC k141_50273 k141_50273_74 65214 66554 - 2.A.22.5.3
pfam k141_50273 k141_50273_75 66996 67745 + SIMPL
pfam k141_50273 k141_50273_76 67901 68548 + PS_Dcarbxylase
CAZyme k141_50273 k141_50273_77 68896 71463 + GT2
TC k141_50273 k141_50273_78 71487 73709 + 4.D.3.1.6
CAZyme k141_50273 k141_50273_79 73709 74794 + GH8
Gene ID: k141_50273_72
Type: TC
Location: 62338 - 63675 (-)
Gene ID: k141_50273_73
Type: TC
Location: 63789 - 65126 (-)
Gene ID: k141_50273_74
Type: TC
Location: 65214 - 66554 (-)
Gene ID: k141_50273_75
Type: pfam
Location: 66996 - 67745 (+)
Gene ID: k141_50273_76
Type: pfam
Location: 67901 - 68548 (+)
Gene ID: k141_50273_77
Type: CAZyme
Location: 68896 - 71463 (+)
Gene ID: k141_50273_78
Type: TC
Location: 71487 - 73709 (+)
Gene ID: k141_50273_79
Type: CAZyme
Location: 73709 - 74794 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_50273_73 vegan > omnivore 1.50029 0.01276
k141_50273_73 vegetarian > omnivore 1.06325 0.01067
k141_50273_74 vegan > omnivore 1.20258 0.01276
k141_50273_78 vegan > omnivore 3.82128 0.01276
k141_50273_78 vegetarian > omnivore 3.69457 0.01067

🧭 Explore Read Mapping of CGC

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