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Cluster: AG323_bin.12_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_145224 k141_145224_43 41995 43416 - GH1
TC k141_145224 k141_145224_44 43492 45249 - 4.A.3.1.1
TF k141_145224 k141_145224_45 45525 46535 + LacI
TC k141_145224 k141_145224_46 46709 48469 - 4.A.3.1.1
CAZyme k141_145224 k141_145224_47 48646 50088 - GH1
TF k141_145224 k141_145224_48 50430 51467 + LacI
CAZyme k141_145224 k141_145224_49 51729 53168 - GH1
TC k141_145224 k141_145224_50 53235 54998 - 4.A.3.1.1
TF k141_145224 k141_145224_51 55356 56360 + LacI
TC k141_145224 k141_145224_52 56575 56913 + 4.A.3.1.2
Gene ID: k141_145224_43
Type: CAZyme
Location: 41995 - 43416 (-)
Gene ID: k141_145224_44
Type: TC
Location: 43492 - 45249 (-)
Gene ID: k141_145224_45
Type: TF
Location: 45525 - 46535 (+)
Gene ID: k141_145224_46
Type: TC
Location: 46709 - 48469 (-)
Gene ID: k141_145224_47
Type: CAZyme
Location: 48646 - 50088 (-)
Gene ID: k141_145224_48
Type: TF
Location: 50430 - 51467 (+)
Gene ID: k141_145224_49
Type: CAZyme
Location: 51729 - 53168 (-)
Gene ID: k141_145224_50
Type: TC
Location: 53235 - 54998 (-)
Gene ID: k141_145224_51
Type: TF
Location: 55356 - 56360 (+)
Gene ID: k141_145224_52
Type: TC
Location: 56575 - 56913 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_145224_48 vegetarian > omnivore 1.02169 0.02677

🧭 Explore Read Mapping of CGC

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