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Cluster: AG320_69_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_409547 k141_409547_6 6301 7233 + GT2
TC k141_409547 k141_409547_7 7710 8825 + 3.A.1.2.3
TC k141_409547 k141_409547_8 8932 10440 + 3.A.1.2.3
TC k141_409547 k141_409547_9 10472 11476 + 3.A.1.2.3
NULL(UNKNOWN) k141_409547 k141_409547_10 11645 12043 + NULL(UNKNOWN)
[View Structural Homologs]
TF k141_409547 k141_409547_11 12165 13796 + HTH_AraC | HTH_AraC
TC k141_409547 k141_409547_12 13891 16071 + 9.B.33.1.1
STP k141_409547 k141_409547_13 16064 17041 + Peripla_BP_1
TC k141_409547 k141_409547_14 17113 18123 + 3.A.1.2.3
pfam k141_409547 k141_409547_15 18141 18767 - DUF6553
TC k141_409547 k141_409547_16 18975 20525 + 2.A.15.2.2
TC k141_409547 k141_409547_17 20727 21500 + 9.B.28.1.2
Gene ID: k141_409547_6
Type: CAZyme
Location: 6301 - 7233 (+)
Gene ID: k141_409547_7
Type: TC
Location: 7710 - 8825 (+)
Gene ID: k141_409547_8
Type: TC
Location: 8932 - 10440 (+)
Gene ID: k141_409547_9
Type: TC
Location: 10472 - 11476 (+)
Gene ID: k141_409547_10
Type:
Location: 11645 - 12043 (+)
Gene ID: k141_409547_11
Type: TF
Location: 12165 - 13796 (+)
Gene ID: k141_409547_12
Type: TC
Location: 13891 - 16071 (+)
Gene ID: k141_409547_13
Type: STP
Location: 16064 - 17041 (+)
Gene ID: k141_409547_14
Type: TC
Location: 17113 - 18123 (+)
Gene ID: k141_409547_15
Type: pfam
Location: 18141 - 18767 (-)
Gene ID: k141_409547_16
Type: TC
Location: 18975 - 20525 (+)
Gene ID: k141_409547_17
Type: TC
Location: 20727 - 21500 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
Oribacterium
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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