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Cluster: AG320_69_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_406975 k141_406975_4 3204 4301 + 9.B.34.1.1
TF k141_406975 k141_406975_5 4494 4952 + GntR
TC k141_406975 k141_406975_6 4949 5848 + 3.A.1.131.1
pfam k141_406975 k141_406975_7 5823 8384 + DUF6449 | DUF6449
TF k141_406975 k141_406975_8 8497 9900 - HTH_AraC
TC k141_406975 k141_406975_9 10002 11765 - 8.A.59.2.1
STP k141_406975 k141_406975_10 12062 13399 + SBP_bac_1
TC k141_406975 k141_406975_11 13404 14276 + 3.A.1.1.28
TC k141_406975 k141_406975_12 14276 15091 + 3.A.1.1.45
CAZyme k141_406975 k141_406975_13 15180 17363 + GH36
pfam k141_406975 k141_406975_14 17380 19287 + ILVD_EDD_N | ILV_EDD_C
TC k141_406975 k141_406975_15 19515 20870 + 2.A.8.1.8
Gene ID: k141_406975_4
Type: TC
Location: 3204 - 4301 (+)
Gene ID: k141_406975_5
Type: TF
Location: 4494 - 4952 (+)
Gene ID: k141_406975_6
Type: TC
Location: 4949 - 5848 (+)
Gene ID: k141_406975_7
Type: pfam
Location: 5823 - 8384 (+)
Gene ID: k141_406975_8
Type: TF
Location: 8497 - 9900 (-)
Gene ID: k141_406975_9
Type: TC
Location: 10002 - 11765 (-)
Gene ID: k141_406975_10
Type: STP
Location: 12062 - 13399 (+)
Gene ID: k141_406975_11
Type: TC
Location: 13404 - 14276 (+)
Gene ID: k141_406975_12
Type: TC
Location: 14276 - 15091 (+)
Gene ID: k141_406975_13
Type: CAZyme
Location: 15180 - 17363 (+)
Gene ID: k141_406975_14
Type: pfam
Location: 17380 - 19287 (+)
Gene ID: k141_406975_15
Type: TC
Location: 19515 - 20870 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
Oribacterium
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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