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Cluster: AG317_70_CGC55

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_31192 k141_31192_2 823 2244 - GH43_35
TF k141_31192 k141_31192_3 2274 2909 - HTH_AraC | HTH_AraC
TC k141_31192 k141_31192_4 3050 4735 - 8.A.59.2.1
TC k141_31192 k141_31192_5 4861 5745 - 3.A.1.1.9
TC k141_31192 k141_31192_6 5762 6694 - 3.A.1.1.9
TC k141_31192 k141_31192_7 6783 8408 - 3.A.1.1.9
TF k141_31192 k141_31192_8 8908 10503 + HTH_AraC
STP k141_31192 k141_31192_9 10500 12197 + HATPase_c
TC k141_31192 k141_31192_10 12323 13267 + 3.A.1.1.10
TC k141_31192 k141_31192_11 13288 14202 + 3.A.1.1.29
Gene ID: k141_31192_2
Type: CAZyme
Location: 823 - 2244 (-)
Gene ID: k141_31192_3
Type: TF
Location: 2274 - 2909 (-)
Gene ID: k141_31192_4
Type: TC
Location: 3050 - 4735 (-)
Gene ID: k141_31192_5
Type: TC
Location: 4861 - 5745 (-)
Gene ID: k141_31192_6
Type: TC
Location: 5762 - 6694 (-)
Gene ID: k141_31192_7
Type: TC
Location: 6783 - 8408 (-)
Gene ID: k141_31192_8
Type: TF
Location: 8908 - 10503 (+)
Gene ID: k141_31192_9
Type: STP
Location: 10500 - 12197 (+)
Gene ID: k141_31192_10
Type: TC
Location: 12323 - 13267 (+)
Gene ID: k141_31192_11
Type: TC
Location: 13288 - 14202 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_31192_5 vegetarian > vegan 1.03786 0.00050
k141_31192_7 vegetarian > vegan 1.15925 0.00050

🧭 Explore Read Mapping of CGC

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