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Cluster: AG317_70_CGC45

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_210992 k141_210992_14 12554 14272 - 4.C.1.1.4
pfam k141_210992 k141_210992_15 14473 15837 + MatE | MatE
CAZyme k141_210992 k141_210992_16 15905 17167 + GT4
STP k141_210992 k141_210992_17 17300 18289 - HATPase_c
TF k141_210992 k141_210992_18 18292 18963 - Trans_reg_C
TC k141_210992 k141_210992_19 19086 20453 + 2.A.66.1.32
Gene ID: k141_210992_14
Type: TC
Location: 12554 - 14272 (-)
Gene ID: k141_210992_15
Type: pfam
Location: 14473 - 15837 (+)
Gene ID: k141_210992_16
Type: CAZyme
Location: 15905 - 17167 (+)
Gene ID: k141_210992_17
Type: STP
Location: 17300 - 18289 (-)
Gene ID: k141_210992_18
Type: TF
Location: 18292 - 18963 (-)
Gene ID: k141_210992_19
Type: TC
Location: 19086 - 20453 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_210992_18 vegetarian > omnivore 1.31654 0.00701

🧭 Explore Read Mapping of CGC

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