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Cluster: AG317_70_CGC34

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_24539 k141_24539_14 16805 17368 - 2.A.107.1.2
STP k141_24539 k141_24539_15 18001 19797 + SBP_bac_5
TC k141_24539 k141_24539_16 19873 20877 + 3.A.1.5.16
TC k141_24539 k141_24539_17 20892 22139 + 3.A.1.5.16
TC k141_24539 k141_24539_18 22153 23163 + 3.A.1.5.16
TC k141_24539 k141_24539_19 23153 23986 + 3.A.1.5.16
CAZyme k141_24539 k141_24539_20 23999 26266 + GH3
TF k141_24539 k141_24539_21 26529 27284 + HTH_DeoR
STP k141_24539 k141_24539_22 27348 28607 + SBP_bac_1
TC k141_24539 k141_24539_23 28689 29600 + 3.A.1.1.20
TC k141_24539 k141_24539_24 29620 30468 + 3.A.1.1.7
pfam k141_24539 k141_24539_25 30507 31412 + AP_endonuc_2
pfam k141_24539 k141_24539_26 31412 32098 + Lactamase_B | Lactamase_B_2
TC k141_24539 k141_24539_27 32330 32641 + 3.A.1.1.29
Gene ID: k141_24539_14
Type: TC
Location: 16805 - 17368 (-)
Gene ID: k141_24539_15
Type: STP
Location: 18001 - 19797 (+)
Gene ID: k141_24539_16
Type: TC
Location: 19873 - 20877 (+)
Gene ID: k141_24539_17
Type: TC
Location: 20892 - 22139 (+)
Gene ID: k141_24539_18
Type: TC
Location: 22153 - 23163 (+)
Gene ID: k141_24539_19
Type: TC
Location: 23153 - 23986 (+)
Gene ID: k141_24539_20
Type: CAZyme
Location: 23999 - 26266 (+)
Gene ID: k141_24539_21
Type: TF
Location: 26529 - 27284 (+)
Gene ID: k141_24539_22
Type: STP
Location: 27348 - 28607 (+)
Gene ID: k141_24539_23
Type: TC
Location: 28689 - 29600 (+)
Gene ID: k141_24539_24
Type: TC
Location: 29620 - 30468 (+)
Gene ID: k141_24539_25
Type: pfam
Location: 30507 - 31412 (+)
Gene ID: k141_24539_26
Type: pfam
Location: 31412 - 32098 (+)
Gene ID: k141_24539_27
Type: TC
Location: 32330 - 32641 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_24539_18 vegetarian > omnivore 1.22363 0.00701
k141_24539_18 vegetarian > vegan 1.11928 0.00050
k141_24539_19 vegetarian > omnivore 1.02529 0.00701

🧭 Explore Read Mapping of CGC

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