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Cluster: AG317_70_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_200607 k141_200607_36 31122 32903 + 8.A.59.2.1
TF k141_200607 k141_200607_37 32900 34510 + HTH_AraC | HTH_AraC
NULL(UNKNOWN) k141_200607 k141_200607_38 34633 36282 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_200607 k141_200607_39 36404 37339 + 3.A.1.1.9
TC k141_200607 k141_200607_40 37358 38260 + 3.A.1.1.9
pfam k141_200607 k141_200607_41 38350 38967 - CBM9_2
TC k141_200607 k141_200607_42 38972 39547 - 4.F.1.1.7
CAZyme k141_200607 k141_200607_43 39544 40752 - GT4
CAZyme k141_200607 k141_200607_44 40911 48425 + GH94 | GT84
Gene ID: k141_200607_36
Type: TC
Location: 31122 - 32903 (+)
Gene ID: k141_200607_37
Type: TF
Location: 32900 - 34510 (+)
Gene ID: k141_200607_38
Type:
Location: 34633 - 36282 (+)
Gene ID: k141_200607_39
Type: TC
Location: 36404 - 37339 (+)
Gene ID: k141_200607_40
Type: TC
Location: 37358 - 38260 (+)
Gene ID: k141_200607_41
Type: pfam
Location: 38350 - 38967 (-)
Gene ID: k141_200607_42
Type: TC
Location: 38972 - 39547 (-)
Gene ID: k141_200607_43
Type: CAZyme
Location: 39544 - 40752 (-)
Gene ID: k141_200607_44
Type: CAZyme
Location: 40911 - 48425 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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