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Cluster: AG317_70_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_195259 k141_195259_1 280 3405 - GH106
TC k141_195259 k141_195259_2 3790 4725 + 3.A.1.1.10
TC k141_195259 k141_195259_3 4742 5674 + 3.A.1.1.10
pfam k141_195259 k141_195259_4 5728 7332 + DUF3502 | SBP_bac_8
TF k141_195259 k141_195259_5 7458 9662 + HTH_AraC | HTH_AraC
CAZyme k141_195259 k141_195259_6 9608 10663 + GH43_24
Gene ID: k141_195259_1
Type: CAZyme
Location: 280 - 3405 (-)
Gene ID: k141_195259_2
Type: TC
Location: 3790 - 4725 (+)
Gene ID: k141_195259_3
Type: TC
Location: 4742 - 5674 (+)
Gene ID: k141_195259_4
Type: pfam
Location: 5728 - 7332 (+)
Gene ID: k141_195259_5
Type: TF
Location: 7458 - 9662 (+)
Gene ID: k141_195259_6
Type: CAZyme
Location: 9608 - 10663 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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