Cluster: AG304_bin.49_CGC7
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 1
- Substrate:
- Genome ID: AG304_bin.49
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_25718 | k141_25718_7 | 18934 | 20178 | - | GT4 |
| pfam | k141_25718 | k141_25718_8 | 20192 | 20956 | - | BcrAD_BadFG |
| pfam | k141_25718 | k141_25718_9 | 21008 | 22171 | - | HGD-D |
| TC | k141_25718 | k141_25718_10 | 22249 | 23034 | - | 3.A.1.5.36 |
| TC | k141_25718 | k141_25718_11 | 23021 | 24019 | - | 3.A.1.5.35 |
| TC | k141_25718 | k141_25718_12 | 24023 | 24850 | - | 3.A.1.5.39 |
| TC | k141_25718 | k141_25718_13 | 24850 | 25803 | - | 3.A.1.5.11 |
| TC | k141_25718 | k141_25718_14 | 25890 | 27500 | - | 3.A.1.5.11 |
| pfam | k141_25718 | k141_25718_15 | 27685 | 28968 | - | HGD-D |
| TC | k141_25718 | k141_25718_16 | 29419 | 30489 | - | 3.A.1.1.3 |
| TC | k141_25718 | k141_25718_17 | 30493 | 31974 | - | 3.A.1.8.1 |
Gene ID: k141_25718_7
Type: CAZyme
Location: 18934 - 20178 (-)
Type: CAZyme
Location: 18934 - 20178 (-)
Gene ID: k141_25718_8
Type: pfam
Location: 20192 - 20956 (-)
Type: pfam
Location: 20192 - 20956 (-)
Gene ID: k141_25718_9
Type: pfam
Location: 21008 - 22171 (-)
Type: pfam
Location: 21008 - 22171 (-)
Gene ID: k141_25718_10
Type: TC
Location: 22249 - 23034 (-)
Type: TC
Location: 22249 - 23034 (-)
Gene ID: k141_25718_11
Type: TC
Location: 23021 - 24019 (-)
Type: TC
Location: 23021 - 24019 (-)
Gene ID: k141_25718_12
Type: TC
Location: 24023 - 24850 (-)
Type: TC
Location: 24023 - 24850 (-)
Gene ID: k141_25718_13
Type: TC
Location: 24850 - 25803 (-)
Type: TC
Location: 24850 - 25803 (-)
Gene ID: k141_25718_14
Type: TC
Location: 25890 - 27500 (-)
Type: TC
Location: 25890 - 27500 (-)
Gene ID: k141_25718_15
Type: pfam
Location: 27685 - 28968 (-)
Type: pfam
Location: 27685 - 28968 (-)
Gene ID: k141_25718_16
Type: TC
Location: 29419 - 30489 (-)
Type: TC
Location: 29419 - 30489 (-)
Gene ID: k141_25718_17
Type: TC
Location: 30493 - 31974 (-)
Type: TC
Location: 30493 - 31974 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_25718_10 | vegan > omnivore | 2.80052 | 0.01287 |
| k141_25718_11 | vegan > omnivore | 1.48755 | 0.01287 |
| k141_25718_12 | vegan > omnivore | 2.98700 | 0.01287 |
| k141_25718_13 | vegan > omnivore | 2.70707 | 0.01287 |
| k141_25718_14 | vegan > omnivore | 3.28748 | 0.01287 |