Cluster: AG299_maxbin.007_CGC7
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 3
- Substrate:
- Genome ID: AG299_maxbin.007
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_73984 | k141_73984_17 | 17700 | 18038 | - | 4.A.3.1.2 |
| TF | k141_73984 | k141_73984_18 | 18253 | 19287 | - | LacI |
| TC | k141_73984 | k141_73984_19 | 19615 | 21390 | + | 4.A.3.1.1 |
| CAZyme | k141_73984 | k141_73984_20 | 21457 | 22896 | + | GH1 |
| TF | k141_73984 | k141_73984_21 | 23158 | 24195 | - | LacI |
| CAZyme | k141_73984 | k141_73984_22 | 24537 | 25979 | + | GH1 |
| TC | k141_73984 | k141_73984_23 | 26155 | 27915 | + | 4.A.3.1.1 |
| TF | k141_73984 | k141_73984_24 | 28250 | 29260 | - | LacI |
| TC | k141_73984 | k141_73984_25 | 29538 | 31295 | + | 4.A.3.1.1 |
| CAZyme | k141_73984 | k141_73984_26 | 31371 | 32792 | + | GH1 |
Gene ID: k141_73984_17
Type: TC
Location: 17700 - 18038 (-)
Type: TC
Location: 17700 - 18038 (-)
Gene ID: k141_73984_18
Type: TF
Location: 18253 - 19287 (-)
Type: TF
Location: 18253 - 19287 (-)
Gene ID: k141_73984_19
Type: TC
Location: 19615 - 21390 (+)
Type: TC
Location: 19615 - 21390 (+)
Gene ID: k141_73984_20
Type: CAZyme
Location: 21457 - 22896 (+)
Type: CAZyme
Location: 21457 - 22896 (+)
Gene ID: k141_73984_21
Type: TF
Location: 23158 - 24195 (-)
Type: TF
Location: 23158 - 24195 (-)
Gene ID: k141_73984_22
Type: CAZyme
Location: 24537 - 25979 (+)
Type: CAZyme
Location: 24537 - 25979 (+)
Gene ID: k141_73984_23
Type: TC
Location: 26155 - 27915 (+)
Type: TC
Location: 26155 - 27915 (+)
Gene ID: k141_73984_24
Type: TF
Location: 28250 - 29260 (-)
Type: TF
Location: 28250 - 29260 (-)
Gene ID: k141_73984_25
Type: TC
Location: 29538 - 31295 (+)
Type: TC
Location: 29538 - 31295 (+)
Gene ID: k141_73984_26
Type: CAZyme
Location: 31371 - 32792 (+)
Type: CAZyme
Location: 31371 - 32792 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.