Cluster: AG299_maxbin.007_CGC1
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate:
- Genome ID: AG299_maxbin.007
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_72803 | k141_72803_24 | 22869 | 23405 | - | 4.A.1.2.6 |
| pfam | k141_72803 | k141_72803_25 | 23546 | 24391 | - | Hydrolase_3 |
| CAZyme | k141_72803 | k141_72803_26 | 24404 | 25852 | - | GH1 |
| TF | k141_72803 | k141_72803_27 | 26020 | 27012 | - | 0035607 |
| CAZyme | k141_72803 | k141_72803_28 | 27127 | 29718 | + | GH106 |
| TF | k141_72803 | k141_72803_29 | 29883 | 30737 | + | HTH_6 |
| STP | k141_72803 | k141_72803_30 | 31134 | 31814 | - | Pribosyltran |
| TC | k141_72803 | k141_72803_31 | 32252 | 35020 | + | 3.A.3.4.1 |
Gene ID: k141_72803_24
Type: TC
Location: 22869 - 23405 (-)
Type: TC
Location: 22869 - 23405 (-)
Gene ID: k141_72803_25
Type: pfam
Location: 23546 - 24391 (-)
Type: pfam
Location: 23546 - 24391 (-)
Gene ID: k141_72803_26
Type: CAZyme
Location: 24404 - 25852 (-)
Type: CAZyme
Location: 24404 - 25852 (-)
Gene ID: k141_72803_27
Type: TF
Location: 26020 - 27012 (-)
Type: TF
Location: 26020 - 27012 (-)
Gene ID: k141_72803_28
Type: CAZyme
Location: 27127 - 29718 (+)
Type: CAZyme
Location: 27127 - 29718 (+)
Gene ID: k141_72803_29
Type: TF
Location: 29883 - 30737 (+)
Type: TF
Location: 29883 - 30737 (+)
Gene ID: k141_72803_30
Type: STP
Location: 31134 - 31814 (-)
Type: STP
Location: 31134 - 31814 (-)
Gene ID: k141_72803_31
Type: TC
Location: 32252 - 35020 (+)
Type: TC
Location: 32252 - 35020 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.