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Cluster: AG288_100_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_51973 k141_51973_9 11153 12265 - GT28
TC k141_51973 k141_51973_10 12262 13467 - 2.A.103.1.1
pfam k141_51973 k141_51973_11 13461 14900 - Mur_ligase_C | Mur_ligase_M | MurD-like_N
TC k141_51973 k141_51973_12 14943 16097 - 9.B.146.1.6
Gene ID: k141_51973_9
Type: CAZyme
Location: 11153 - 12265 (-)
Gene ID: k141_51973_10
Type: TC
Location: 12262 - 13467 (-)
Gene ID: k141_51973_11
Type: pfam
Location: 13461 - 14900 (-)
Gene ID: k141_51973_12
Type: TC
Location: 14943 - 16097 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_51973_9 vegan > omnivore 1.62051 0.01332
k141_51973_10 vegan > omnivore 2.20943 0.01332
k141_51973_10 vegetarian > omnivore 2.00092 0.00565

🧭 Explore Read Mapping of CGC

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