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Cluster: AG288_100_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_117394 k141_117394_11 10914 12251 - 2.A.22.5.3
TC k141_117394 k141_117394_12 12342 13742 - 2.A.22.5.3
TC k141_117394 k141_117394_13 13781 15121 - 2.A.22.5.3
pfam k141_117394 k141_117394_14 15577 16314 + SIMPL
pfam k141_117394 k141_117394_15 16460 17107 + PS_Dcarbxylase
CAZyme k141_117394 k141_117394_16 17463 20033 + GT2
TC k141_117394 k141_117394_17 20054 22276 + 4.D.3.1.6
CAZyme k141_117394 k141_117394_18 22276 23361 + GH8
Gene ID: k141_117394_11
Type: TC
Location: 10914 - 12251 (-)
Gene ID: k141_117394_12
Type: TC
Location: 12342 - 13742 (-)
Gene ID: k141_117394_13
Type: TC
Location: 13781 - 15121 (-)
Gene ID: k141_117394_14
Type: pfam
Location: 15577 - 16314 (+)
Gene ID: k141_117394_15
Type: pfam
Location: 16460 - 17107 (+)
Gene ID: k141_117394_16
Type: CAZyme
Location: 17463 - 20033 (+)
Gene ID: k141_117394_17
Type: TC
Location: 20054 - 22276 (+)
Gene ID: k141_117394_18
Type: CAZyme
Location: 22276 - 23361 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_117394_11 vegetarian > omnivore 1.47267 0.00565
k141_117394_13 vegetarian > omnivore 1.18399 0.00565

🧭 Explore Read Mapping of CGC

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