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Cluster: AG288_100_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_241187 k141_241187_10 12713 13666 - 2.A.7.3.19
pfam k141_241187 k141_241187_11 13702 15081 - SDH_alpha | SDH_beta
CAZyme k141_241187 k141_241187_12 15270 16211 + GT9
CAZyme k141_241187 k141_241187_13 16234 17052 - GT2
CAZyme k141_241187 k141_241187_14 17052 17819 - GT2
Gene ID: k141_241187_10
Type: TC
Location: 12713 - 13666 (-)
Gene ID: k141_241187_11
Type: pfam
Location: 13702 - 15081 (-)
Gene ID: k141_241187_12
Type: CAZyme
Location: 15270 - 16211 (+)
Gene ID: k141_241187_13
Type: CAZyme
Location: 16234 - 17052 (-)
Gene ID: k141_241187_14
Type: CAZyme
Location: 17052 - 17819 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_241187_10 vegan > omnivore 1.63747 0.01332

🧭 Explore Read Mapping of CGC

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