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Cluster: AG287_bin.71_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_182008 k141_182008_16 15567 16493 - CE7
TC k141_182008 k141_182008_17 16625 17452 - 3.A.1.5.27
TC k141_182008 k141_182008_18 17453 19468 - 3.A.1.5.25
TC k141_182008 k141_182008_19 19472 20428 - 3.A.1.5.38
TC k141_182008 k141_182008_20 20584 22197 - 3.A.1.5.27
pfam k141_182008 k141_182008_21 22563 24503 - GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC k141_182008 k141_182008_22 24510 26813 - 2.A.66.4.4
pfam k141_182008 k141_182008_23 26817 27317 - tRNA_edit
pfam k141_182008 k141_182008_24 27451 30330 - UvrA_DNA-bind | UvrA_inter
TC k141_182008 k141_182008_25 30590 31420 + 3.A.1.132.3
Gene ID: k141_182008_16
Type: CAZyme
Location: 15567 - 16493 (-)
Gene ID: k141_182008_17
Type: TC
Location: 16625 - 17452 (-)
Gene ID: k141_182008_18
Type: TC
Location: 17453 - 19468 (-)
Gene ID: k141_182008_19
Type: TC
Location: 19472 - 20428 (-)
Gene ID: k141_182008_20
Type: TC
Location: 20584 - 22197 (-)
Gene ID: k141_182008_21
Type: pfam
Location: 22563 - 24503 (-)
Gene ID: k141_182008_22
Type: TC
Location: 24510 - 26813 (-)
Gene ID: k141_182008_23
Type: pfam
Location: 26817 - 27317 (-)
Gene ID: k141_182008_24
Type: pfam
Location: 27451 - 30330 (-)
Gene ID: k141_182008_25
Type: TC
Location: 30590 - 31420 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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