Cluster: AG287_bin.71_CGC11
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 3
- Substrate: host glycan
- Genome ID: AG287_bin.71
- CGC Family ID: CGCFAM_00014
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_85906 | k141_85906_1 | 94 | 1515 | - | GH1 |
| TC | k141_85906 | k141_85906_2 | 1592 | 3370 | - | 4.A.3.1.1 |
| TF | k141_85906 | k141_85906_3 | 3646 | 4656 | + | LacI |
| TC | k141_85906 | k141_85906_4 | 4989 | 6749 | - | 4.A.3.1.1 |
| CAZyme | k141_85906 | k141_85906_5 | 6926 | 8368 | - | GH1 |
| TF | k141_85906 | k141_85906_6 | 8710 | 9747 | + | LacI |
| CAZyme | k141_85906 | k141_85906_7 | 10018 | 11457 | - | GH1 |
| TC | k141_85906 | k141_85906_8 | 11524 | 13299 | - | 4.A.3.1.1 |
Gene ID: k141_85906_1
Type: CAZyme
Location: 94 - 1515 (-)
Type: CAZyme
Location: 94 - 1515 (-)
Gene ID: k141_85906_2
Type: TC
Location: 1592 - 3370 (-)
Type: TC
Location: 1592 - 3370 (-)
Gene ID: k141_85906_3
Type: TF
Location: 3646 - 4656 (+)
Type: TF
Location: 3646 - 4656 (+)
Gene ID: k141_85906_4
Type: TC
Location: 4989 - 6749 (-)
Type: TC
Location: 4989 - 6749 (-)
Gene ID: k141_85906_5
Type: CAZyme
Location: 6926 - 8368 (-)
Type: CAZyme
Location: 6926 - 8368 (-)
Gene ID: k141_85906_6
Type: TF
Location: 8710 - 9747 (+)
Type: TF
Location: 8710 - 9747 (+)
Gene ID: k141_85906_7
Type: CAZyme
Location: 10018 - 11457 (-)
Type: CAZyme
Location: 10018 - 11457 (-)
Gene ID: k141_85906_8
Type: TC
Location: 11524 - 13299 (-)
Type: TC
Location: 11524 - 13299 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.