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Cluster: AG285_bin.15_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_48707 k141_48707_3 2123 3277 + GT4
CAZyme k141_48707 k141_48707_4 3328 4356 + GT8
CAZyme k141_48707 k141_48707_5 4349 5353 + GT2
CAZyme k141_48707 k141_48707_6 5360 8086 + GT2
TC k141_48707 k141_48707_7 8151 9692 + 2.A.50.2.1
pfam k141_48707 k141_48707_8 9763 11013 - DHHW
TC k141_48707 k141_48707_9 11228 11995 + 3.A.1.103.6
TC k141_48707 k141_48707_10 12005 13414 + 3.A.1.103.5
TC k141_48707 k141_48707_11 13502 15001 - 9.B.18.1.1
CAZyme k141_48707 k141_48707_12 15057 16241 + GT4
pfam k141_48707 k141_48707_13 16455 18323 + DUF4012
CAZyme k141_48707 k141_48707_14 18463 21435 - GT111 | GT2 | GT8
Gene ID: k141_48707_3
Type: CAZyme
Location: 2123 - 3277 (+)
Gene ID: k141_48707_4
Type: CAZyme
Location: 3328 - 4356 (+)
Gene ID: k141_48707_5
Type: CAZyme
Location: 4349 - 5353 (+)
Gene ID: k141_48707_6
Type: CAZyme
Location: 5360 - 8086 (+)
Gene ID: k141_48707_7
Type: TC
Location: 8151 - 9692 (+)
Gene ID: k141_48707_8
Type: pfam
Location: 9763 - 11013 (-)
Gene ID: k141_48707_9
Type: TC
Location: 11228 - 11995 (+)
Gene ID: k141_48707_10
Type: TC
Location: 12005 - 13414 (+)
Gene ID: k141_48707_11
Type: TC
Location: 13502 - 15001 (-)
Gene ID: k141_48707_12
Type: CAZyme
Location: 15057 - 16241 (+)
Gene ID: k141_48707_13
Type: pfam
Location: 16455 - 18323 (+)
Gene ID: k141_48707_14
Type: CAZyme
Location: 18463 - 21435 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_48707_3 vegan > omnivore 13.81345 0.00000
k141_48707_3 vegetarian > omnivore 17.32743 0.00565
k141_48707_3 vegetarian > vegan 3.51397 0.00014
k141_48707_9 vegetarian > omnivore 1.94688 0.00565
k141_48707_9 vegetarian > vegan 1.37465 0.00014
k141_48707_10 vegetarian > omnivore 1.29265 0.00565
k141_48707_10 vegetarian > vegan 2.81928 0.00014
k141_48707_12 vegan > omnivore 11.96936 0.00000
k141_48707_12 vegetarian > omnivore 17.73919 0.00565
k141_48707_12 vegetarian > vegan 5.76982 0.00014
k141_48707_14 vegetarian > omnivore 4.04749 0.00565
k141_48707_14 vegetarian > vegan 4.71196 0.00014

🧭 Explore Read Mapping of CGC

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