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Cluster: AG283_bin.14_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_66842 k141_66842_28 29477 30013 - 4.A.1.2.6
CAZyme k141_66842 k141_66842_29 30268 31716 - GH1
TF k141_66842 k141_66842_30 31889 32896 - HTH_AraC
CAZyme k141_66842 k141_66842_31 33013 35613 + GH106
TF k141_66842 k141_66842_32 35656 36510 + HTH_6
STP k141_66842 k141_66842_33 36846 37529 - Pribosyltran
TC k141_66842 k141_66842_34 37968 40736 + 3.A.3.4.1
TF k141_66842 k141_66842_35 40803 42347 - GerE
CAZyme k141_66842 k141_66842_36 42612 43925 - GH140
TC k141_66842 k141_66842_37 44138 45565 - 4.A.1.2.11
Gene ID: k141_66842_28
Type: TC
Location: 29477 - 30013 (-)
Gene ID: k141_66842_29
Type: CAZyme
Location: 30268 - 31716 (-)
Gene ID: k141_66842_30
Type: TF
Location: 31889 - 32896 (-)
Gene ID: k141_66842_31
Type: CAZyme
Location: 33013 - 35613 (+)
Gene ID: k141_66842_32
Type: TF
Location: 35656 - 36510 (+)
Gene ID: k141_66842_33
Type: STP
Location: 36846 - 37529 (-)
Gene ID: k141_66842_34
Type: TC
Location: 37968 - 40736 (+)
Gene ID: k141_66842_35
Type: TF
Location: 40803 - 42347 (-)
Gene ID: k141_66842_36
Type: CAZyme
Location: 42612 - 43925 (-)
Gene ID: k141_66842_37
Type: TC
Location: 44138 - 45565 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_66842_35 vegetarian > omnivore 1.84258 0.01711

🧭 Explore Read Mapping of CGC

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