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Cluster: AG283_bin.14_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_43165 k141_43165_6 6879 7709 - 3.A.1.132.3
pfam k141_43165 k141_43165_7 7971 10850 + UvrA_DNA-bind | UvrA_inter
pfam k141_43165 k141_43165_8 10984 11484 + tRNA_edit
TC k141_43165 k141_43165_9 11488 13791 + 2.A.66.4.4
pfam k141_43165 k141_43165_10 13798 15738 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC k141_43165 k141_43165_11 16104 17717 + 3.A.1.5.27
TC k141_43165 k141_43165_12 17873 18829 + 3.A.1.5.38
TC k141_43165 k141_43165_13 18833 20848 + 3.A.1.5.25
TC k141_43165 k141_43165_14 20849 21676 + 3.A.1.5.27
CAZyme k141_43165 k141_43165_15 21808 22734 + CE7
Gene ID: k141_43165_6
Type: TC
Location: 6879 - 7709 (-)
Gene ID: k141_43165_7
Type: pfam
Location: 7971 - 10850 (+)
Gene ID: k141_43165_8
Type: pfam
Location: 10984 - 11484 (+)
Gene ID: k141_43165_9
Type: TC
Location: 11488 - 13791 (+)
Gene ID: k141_43165_10
Type: pfam
Location: 13798 - 15738 (+)
Gene ID: k141_43165_11
Type: TC
Location: 16104 - 17717 (+)
Gene ID: k141_43165_12
Type: TC
Location: 17873 - 18829 (+)
Gene ID: k141_43165_13
Type: TC
Location: 18833 - 20848 (+)
Gene ID: k141_43165_14
Type: TC
Location: 20849 - 21676 (+)
Gene ID: k141_43165_15
Type: CAZyme
Location: 21808 - 22734 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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