Cluster: AG281_bin.26_CGC11
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 1
- Substrate:
- Genome ID: AG281_bin.26
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_108297 | k141_108297_44 | 65900 | 67144 | - | GT4 |
| pfam | k141_108297 | k141_108297_45 | 67159 | 67923 | - | BcrAD_BadFG |
| pfam | k141_108297 | k141_108297_46 | 67975 | 69138 | - | HGD-D |
| TC | k141_108297 | k141_108297_47 | 69216 | 70001 | - | 3.A.1.5.36 |
| TC | k141_108297 | k141_108297_48 | 69988 | 70986 | - | 3.A.1.5.35 |
| TC | k141_108297 | k141_108297_49 | 70990 | 71817 | - | 3.A.1.5.39 |
| TC | k141_108297 | k141_108297_50 | 71817 | 72770 | - | 3.A.1.5.11 |
| TC | k141_108297 | k141_108297_51 | 72857 | 74467 | - | 3.A.1.5.11 |
| pfam | k141_108297 | k141_108297_52 | 74652 | 75935 | - | HGD-D |
| TC | k141_108297 | k141_108297_53 | 76386 | 77456 | - | 3.A.1.1.3 |
| TC | k141_108297 | k141_108297_54 | 77460 | 78941 | - | 3.A.1.8.1 |
Gene ID: k141_108297_44
Type: CAZyme
Location: 65900 - 67144 (-)
Type: CAZyme
Location: 65900 - 67144 (-)
Gene ID: k141_108297_45
Type: pfam
Location: 67159 - 67923 (-)
Type: pfam
Location: 67159 - 67923 (-)
Gene ID: k141_108297_46
Type: pfam
Location: 67975 - 69138 (-)
Type: pfam
Location: 67975 - 69138 (-)
Gene ID: k141_108297_47
Type: TC
Location: 69216 - 70001 (-)
Type: TC
Location: 69216 - 70001 (-)
Gene ID: k141_108297_48
Type: TC
Location: 69988 - 70986 (-)
Type: TC
Location: 69988 - 70986 (-)
Gene ID: k141_108297_49
Type: TC
Location: 70990 - 71817 (-)
Type: TC
Location: 70990 - 71817 (-)
Gene ID: k141_108297_50
Type: TC
Location: 71817 - 72770 (-)
Type: TC
Location: 71817 - 72770 (-)
Gene ID: k141_108297_51
Type: TC
Location: 72857 - 74467 (-)
Type: TC
Location: 72857 - 74467 (-)
Gene ID: k141_108297_52
Type: pfam
Location: 74652 - 75935 (-)
Type: pfam
Location: 74652 - 75935 (-)
Gene ID: k141_108297_53
Type: TC
Location: 76386 - 77456 (-)
Type: TC
Location: 76386 - 77456 (-)
Gene ID: k141_108297_54
Type: TC
Location: 77460 - 78941 (-)
Type: TC
Location: 77460 - 78941 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_108297_47 | vegan > omnivore | 2.66580 | 0.01057 |
| k141_108297_48 | vegan > omnivore | 1.35187 | 0.01057 |
| k141_108297_49 | vegan > omnivore | 2.82998 | 0.01057 |
| k141_108297_50 | vegan > omnivore | 2.56278 | 0.01057 |
| k141_108297_51 | vegan > omnivore | 2.92883 | 0.01057 |