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Cluster: AG280_bin.78_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_118247 k141_118247_7 6914 9049 + GH50
CAZyme k141_118247 k141_118247_8 9046 11037 + GH50
NULL(UNKNOWN) k141_118247 k141_118247_9 11043 11849 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_118247 k141_118247_10 11836 13284 + GH28
pfam k141_118247 k141_118247_11 13288 13887 - Lysine_decarbox | LDcluster4
TC k141_118247 k141_118247_12 14239 15666 + 3.A.15.3.1
pfam k141_118247 k141_118247_13 15663 17189 + HlyD_3 | HlyD_D23
TC k141_118247 k141_118247_14 17186 17908 + 3.A.1.122.2
TC k141_118247 k141_118247_15 17905 19176 + 3.A.1.122.2
Gene ID: k141_118247_7
Type: CAZyme
Location: 6914 - 9049 (+)
Gene ID: k141_118247_8
Type: CAZyme
Location: 9046 - 11037 (+)
Gene ID: k141_118247_9
Type:
Location: 11043 - 11849 (+)
Gene ID: k141_118247_10
Type: CAZyme
Location: 11836 - 13284 (+)
Gene ID: k141_118247_11
Type: pfam
Location: 13288 - 13887 (-)
Gene ID: k141_118247_12
Type: TC
Location: 14239 - 15666 (+)
Gene ID: k141_118247_13
Type: pfam
Location: 15663 - 17189 (+)
Gene ID: k141_118247_14
Type: TC
Location: 17186 - 17908 (+)
Gene ID: k141_118247_15
Type: TC
Location: 17905 - 19176 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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