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Cluster: AG268_4_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_51552 k141_51552_31 34483 35592 + GT28
pfam k141_51552 k141_51552_32 35765 36451 + RelA_SpoT
TC k141_51552 k141_51552_33 36571 37005 - 3.A.2.3.3
TC k141_51552 k141_51552_34 37024 38850 - 3.A.2.3.3
TC k141_51552 k141_51552_35 38847 39461 - 3.A.2.3.3
TC k141_51552 k141_51552_36 39472 40770 - 3.A.2.3.3
TC k141_51552 k141_51552_37 40781 42508 - 3.A.2.3.3
NULL(UNKNOWN) k141_51552 k141_51552_38 42527 43048 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) k141_51552 k141_51552_39 43064 43624 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_51552 k141_51552_40 43878 44777 + 3.A.1.32.2
TC k141_51552 k141_51552_41 44770 47412 + 3.A.1.32.2
Gene ID: k141_51552_31
Type: CAZyme
Location: 34483 - 35592 (+)
Gene ID: k141_51552_32
Type: pfam
Location: 35765 - 36451 (+)
Gene ID: k141_51552_33
Type: TC
Location: 36571 - 37005 (-)
Gene ID: k141_51552_34
Type: TC
Location: 37024 - 38850 (-)
Gene ID: k141_51552_35
Type: TC
Location: 38847 - 39461 (-)
Gene ID: k141_51552_36
Type: TC
Location: 39472 - 40770 (-)
Gene ID: k141_51552_37
Type: TC
Location: 40781 - 42508 (-)
Gene ID: k141_51552_38
Type:
Location: 42527 - 43048 (-)
Gene ID: k141_51552_39
Type:
Location: 43064 - 43624 (-)
Gene ID: k141_51552_40
Type: TC
Location: 43878 - 44777 (+)
Gene ID: k141_51552_41
Type: TC
Location: 44770 - 47412 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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