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Cluster: AG268_4_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_89122 k141_89122_1 303 1685 - 2.A.40.1.4
pfam k141_89122 k141_89122_2 1982 2545 - BioY
pfam k141_89122 k141_89122_3 2681 3418 + BPL_C | BPL_LplA_LipB
TC k141_89122 k141_89122_4 3432 3980 + 2.A.51.1.6
TC k141_89122 k141_89122_5 3980 4540 + 2.A.51.1.6
pfam k141_89122 k141_89122_6 4640 5515 + Lactamase_B
CAZyme k141_89122 k141_89122_7 5576 7060 - GH77
TC k141_89122 k141_89122_8 7146 7988 - 3.A.1.1.45
TC k141_89122 k141_89122_9 7988 8839 - 3.A.1.1.45
Gene ID: k141_89122_1
Type: TC
Location: 303 - 1685 (-)
Gene ID: k141_89122_2
Type: pfam
Location: 1982 - 2545 (-)
Gene ID: k141_89122_3
Type: pfam
Location: 2681 - 3418 (+)
Gene ID: k141_89122_4
Type: TC
Location: 3432 - 3980 (+)
Gene ID: k141_89122_5
Type: TC
Location: 3980 - 4540 (+)
Gene ID: k141_89122_6
Type: pfam
Location: 4640 - 5515 (+)
Gene ID: k141_89122_7
Type: CAZyme
Location: 5576 - 7060 (-)
Gene ID: k141_89122_8
Type: TC
Location: 7146 - 7988 (-)
Gene ID: k141_89122_9
Type: TC
Location: 7988 - 8839 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_89122_2 vegetarian > omnivore 1.18946 0.00565
k141_89122_2 vegetarian > vegan 1.17566 0.02117
k141_89122_6 vegetarian > omnivore 1.97057 0.00565

🧭 Explore Read Mapping of CGC

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