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Cluster: AG236_100_CGC38

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_346087 k141_346087_31 31916 33247 - CE1
CAZyme k141_346087 k141_346087_32 33488 35128 + CE6
CAZyme k141_346087 k141_346087_33 35162 37351 + CE1 | GH10
CAZyme k141_346087 k141_346087_34 37385 39325 + CE1
CAZyme k141_346087 k141_346087_35 39356 41230 + GH97
CAZyme k141_346087 k141_346087_36 41253 42617 + CBM6 | GH43_29
CAZyme k141_346087 k141_346087_37 42635 44932 + GH31_4
CAZyme k141_346087 k141_346087_38 44937 47528 + GH3
NULL(UNKNOWN) k141_346087 k141_346087_39 47739 48431 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_346087 k141_346087_40 48428 49909 + GH43_7 | GH43_7
pfam k141_346087 k141_346087_41 50812 52608 - SusD_RagB | SusD-like_3
TC k141_346087 k141_346087_42 52630 55740 - 1.B.14.6.1
Gene ID: k141_346087_31
Type: CAZyme
Location: 31916 - 33247 (-)
Gene ID: k141_346087_32
Type: CAZyme
Location: 33488 - 35128 (+)
Gene ID: k141_346087_33
Type: CAZyme
Location: 35162 - 37351 (+)
Gene ID: k141_346087_34
Type: CAZyme
Location: 37385 - 39325 (+)
Gene ID: k141_346087_35
Type: CAZyme
Location: 39356 - 41230 (+)
Gene ID: k141_346087_36
Type: CAZyme
Location: 41253 - 42617 (+)
Gene ID: k141_346087_37
Type: CAZyme
Location: 42635 - 44932 (+)
Gene ID: k141_346087_38
Type: CAZyme
Location: 44937 - 47528 (+)
Gene ID: k141_346087_39
Type:
Location: 47739 - 48431 (+)
Gene ID: k141_346087_40
Type: CAZyme
Location: 48428 - 49909 (+)
Gene ID: k141_346087_41
Type: pfam
Location: 50812 - 52608 (-)
Gene ID: k141_346087_42
Type: TC
Location: 52630 - 55740 (-)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_346087_42 vegetarian > vegan 1.35212 0.03761

🧭 Explore Read Mapping of CGC

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