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Cluster: AG236_100_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_251518 k141_251518_14 12907 14316 + 2.A.2.3.2
CAZyme k141_251518 k141_251518_15 14345 15541 + GH10
CAZyme k141_251518 k141_251518_16 15632 16609 + GH43_1
NULL(UNKNOWN) k141_251518 k141_251518_17 16829 16939 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_251518 k141_251518_18 17403 17612 + 1.B.14.6.2
TC k141_251518 k141_251518_19 17663 18409 + 1.B.14.6.1
TC k141_251518 k141_251518_20 18531 20666 + 1.B.14.6.1
NULL(UNKNOWN) k141_251518 k141_251518_21 20606 21796 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_251518 k141_251518_22 21991 23268 + GH5_46
CAZyme k141_251518 k141_251518_23 23323 25569 + GH3
CAZyme k141_251518 k141_251518_24 25782 28049 + GH3
Gene ID: k141_251518_14
Type: TC
Location: 12907 - 14316 (+)
Gene ID: k141_251518_15
Type: CAZyme
Location: 14345 - 15541 (+)
Gene ID: k141_251518_16
Type: CAZyme
Location: 15632 - 16609 (+)
Gene ID: k141_251518_17
Type:
Location: 16829 - 16939 (+)
Gene ID: k141_251518_18
Type: TC
Location: 17403 - 17612 (+)
Gene ID: k141_251518_19
Type: TC
Location: 17663 - 18409 (+)
Gene ID: k141_251518_20
Type: TC
Location: 18531 - 20666 (+)
Gene ID: k141_251518_21
Type:
Location: 20606 - 21796 (+)
Gene ID: k141_251518_22
Type: CAZyme
Location: 21991 - 23268 (+)
Gene ID: k141_251518_23
Type: CAZyme
Location: 23323 - 25569 (+)
Gene ID: k141_251518_24
Type: CAZyme
Location: 25782 - 28049 (+)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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