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Cluster: AG226_bin.94_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_243262 k141_243262_28 40439 41566 + GT4
pfam k141_243262 k141_243262_29 41606 42448 + LicD
TF k141_243262 k141_243262_30 42547 44328 + 0044258
TC k141_243262 k141_243262_31 44397 45638 + 9.A.28.1.1
pfam k141_243262 k141_243262_32 45738 46676 + Choline_kinase | APH
TC k141_243262 k141_243262_33 46673 47632 + 2.A.7.18.1
Gene ID: k141_243262_28
Type: CAZyme
Location: 40439 - 41566 (+)
Gene ID: k141_243262_29
Type: pfam
Location: 41606 - 42448 (+)
Gene ID: k141_243262_30
Type: TF
Location: 42547 - 44328 (+)
Gene ID: k141_243262_31
Type: TC
Location: 44397 - 45638 (+)
Gene ID: k141_243262_32
Type: pfam
Location: 45738 - 46676 (+)
Gene ID: k141_243262_33
Type: TC
Location: 46673 - 47632 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_243262_28 vegetarian > omnivore 1.53291 0.00054
k141_243262_29 vegan > omnivore 2.16614 0.01416
k141_243262_29 vegetarian > omnivore 3.03392 0.00054
k141_243262_30 vegetarian > omnivore 1.16060 0.00054
k141_243262_31 vegan > omnivore 1.10699 0.01416
k141_243262_31 vegetarian > omnivore 1.42642 0.00054
k141_243262_32 vegetarian > omnivore 2.44496 0.00054
k141_243262_32 vegetarian > vegan 1.55611 0.00315
k141_243262_33 vegetarian > omnivore 1.39386 0.00054
k141_243262_33 vegetarian > vegan 1.20919 0.00315

🧭 Explore Read Mapping of CGC

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