Cluster: AG221_11_CGC9
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 2
- Substrate:
- Genome ID: AG221_11
- CGC Family ID: CGCFAM_07048
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_40410 | k141_40410_15 | 16569 | 17873 | + | 2.A.55.2.6 |
| pfam | k141_40410 | k141_40410_16 | 18140 | 18685 | - | Ubie_methyltran | Methyltransf_11 | Methyltransf_25 | Methyltransf_31 |
| TC | k141_40410 | k141_40410_17 | 18703 | 19371 | - | 2.A.38.4.4 |
| TC | k141_40410 | k141_40410_18 | 19364 | 20707 | - | 2.A.38.4.1 |
| pfam | k141_40410 | k141_40410_19 | 20862 | 22634 | + | MCRA | NAD_binding_8 |
| STP | k141_40410 | k141_40410_20 | 22712 | 23473 | + | Nitroreductase |
| CAZyme | k141_40410 | k141_40410_21 | 23470 | 24609 | - | GH8 |
| CAZyme | k141_40410 | k141_40410_22 | 24624 | 25931 | - | GT2 |
| NULL(UNKNOWN) | k141_40410 | k141_40410_23 | 26074 | 26937 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | k141_40410 | k141_40410_24 | 28110 | 28814 | - | PhoU | PhoU |
| TC | k141_40410 | k141_40410_25 | 28825 | 29580 | - | 3.A.1.7.5 |
| TC | k141_40410 | k141_40410_26 | 29591 | 30472 | - | 3.A.1.7.4 |
| TC | k141_40410 | k141_40410_27 | 30472 | 31371 | - | 3.A.1.7.5 |
Gene ID: k141_40410_15
Type: TC
Location: 16569 - 17873 (+)
Type: TC
Location: 16569 - 17873 (+)
Gene ID: k141_40410_16
Type: pfam
Location: 18140 - 18685 (-)
Type: pfam
Location: 18140 - 18685 (-)
Gene ID: k141_40410_17
Type: TC
Location: 18703 - 19371 (-)
Type: TC
Location: 18703 - 19371 (-)
Gene ID: k141_40410_18
Type: TC
Location: 19364 - 20707 (-)
Type: TC
Location: 19364 - 20707 (-)
Gene ID: k141_40410_19
Type: pfam
Location: 20862 - 22634 (+)
Type: pfam
Location: 20862 - 22634 (+)
Gene ID: k141_40410_20
Type: STP
Location: 22712 - 23473 (+)
Type: STP
Location: 22712 - 23473 (+)
Gene ID: k141_40410_21
Type: CAZyme
Location: 23470 - 24609 (-)
Type: CAZyme
Location: 23470 - 24609 (-)
Gene ID: k141_40410_22
Type: CAZyme
Location: 24624 - 25931 (-)
Type: CAZyme
Location: 24624 - 25931 (-)
Gene ID: k141_40410_23
Type:
Location: 26074 - 26937 (-)
Type:
Location: 26074 - 26937 (-)
Gene ID: k141_40410_24
Type: pfam
Location: 28110 - 28814 (-)
Type: pfam
Location: 28110 - 28814 (-)
Gene ID: k141_40410_25
Type: TC
Location: 28825 - 29580 (-)
Type: TC
Location: 28825 - 29580 (-)
Gene ID: k141_40410_26
Type: TC
Location: 29591 - 30472 (-)
Type: TC
Location: 29591 - 30472 (-)
Gene ID: k141_40410_27
Type: TC
Location: 30472 - 31371 (-)
Type: TC
Location: 30472 - 31371 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Limosilactobacillus
Species
Limosilactobacillus reuteri
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.