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Cluster: AG221_11_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_169050 k141_169050_10 12577 13332 + 2.A.109.1.3
pfam k141_169050 k141_169050_11 13334 13651 + Thioredoxin | AhpC-TSA | Thioredoxin_2 | TraF | Thioredoxin_9
TC k141_169050 k141_169050_12 13722 15044 - 2.A.66.1.13
TF k141_169050 k141_169050_13 15273 15605 - HTH_5
TC k141_169050 k141_169050_14 15653 16216 - 2.A.77.1.3
TC k141_169050 k141_169050_15 16282 17046 - 3.A.1.34.1
TC k141_169050 k141_169050_16 17039 17938 - 3.A.1.34.1
pfam k141_169050 k141_169050_17 17935 18930 - ABC_sub_bind
CAZyme k141_169050 k141_169050_18 19305 20297 - CBM50
Gene ID: k141_169050_10
Type: TC
Location: 12577 - 13332 (+)
Gene ID: k141_169050_11
Type: pfam
Location: 13334 - 13651 (+)
Gene ID: k141_169050_12
Type: TC
Location: 13722 - 15044 (-)
Gene ID: k141_169050_13
Type: TF
Location: 15273 - 15605 (-)
Gene ID: k141_169050_14
Type: TC
Location: 15653 - 16216 (-)
Gene ID: k141_169050_15
Type: TC
Location: 16282 - 17046 (-)
Gene ID: k141_169050_16
Type: TC
Location: 17039 - 17938 (-)
Gene ID: k141_169050_17
Type: pfam
Location: 17935 - 18930 (-)
Gene ID: k141_169050_18
Type: CAZyme
Location: 19305 - 20297 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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