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Cluster: AG215_69_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_20127 k141_20127_41 43369 43827 + 1.A.22.1.4
pfam k141_20127 k141_20127_42 44034 44312 + HNH | HNH_5
CAZyme k141_20127 k141_20127_43 44397 46016 - GH13_31
TF k141_20127 k141_20127_44 46102 46962 + HTH_AraC | HTH_AraC
CAZyme k141_20127 k141_20127_45 47122 49353 + GH36
pfam k141_20127 k141_20127_46 49494 50480 + GFO_IDH_MocA | Shikimate_DH | GFO_IDH_MocA_C | NAD_binding_3 | F420_oxidored | GFO_IDH_MocA_C3
TC k141_20127 k141_20127_47 50521 51177 + 2.A.115.2.3
TF k141_20127 k141_20127_48 51200 52111 - HTH_1
TC k141_20127 k141_20127_49 52248 53564 + 2.A.22.5.2
TC k141_20127 k141_20127_50 53640 54887 - 2.A.1.46.5
Gene ID: k141_20127_41
Type: TC
Location: 43369 - 43827 (+)
Gene ID: k141_20127_42
Type: pfam
Location: 44034 - 44312 (+)
Gene ID: k141_20127_43
Type: CAZyme
Location: 44397 - 46016 (-)
Gene ID: k141_20127_44
Type: TF
Location: 46102 - 46962 (+)
Gene ID: k141_20127_45
Type: CAZyme
Location: 47122 - 49353 (+)
Gene ID: k141_20127_46
Type: pfam
Location: 49494 - 50480 (+)
Gene ID: k141_20127_47
Type: TC
Location: 50521 - 51177 (+)
Gene ID: k141_20127_48
Type: TF
Location: 51200 - 52111 (-)
Gene ID: k141_20127_49
Type: TC
Location: 52248 - 53564 (+)
Gene ID: k141_20127_50
Type: TC
Location: 53640 - 54887 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_C
→
Class
Negativicutes
→
Order
Selenomonadales
→
Family
Selenomonadaceae
→
Genus
Megamonas
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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