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Cluster: AG215_69_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_50255 k141_50255_40 44501 45526 + GH177
TC k141_50255 k141_50255_41 45665 47044 + 2.A.2.3.5
TC k141_50255 k141_50255_42 47072 47674 + 2.A.115.2.14
TF k141_50255 k141_50255_43 47801 48652 - HTH_AraC | HTH_AraC
pfam k141_50255 k141_50255_44 49089 49976 + AP_endonuc_2
TC k141_50255 k141_50255_45 50043 51458 + 2.A.8.1.13
TC k141_50255 k141_50255_46 51487 52392 + 2.A.7.3.37
Gene ID: k141_50255_40
Type: CAZyme
Location: 44501 - 45526 (+)
Gene ID: k141_50255_41
Type: TC
Location: 45665 - 47044 (+)
Gene ID: k141_50255_42
Type: TC
Location: 47072 - 47674 (+)
Gene ID: k141_50255_43
Type: TF
Location: 47801 - 48652 (-)
Gene ID: k141_50255_44
Type: pfam
Location: 49089 - 49976 (+)
Gene ID: k141_50255_45
Type: TC
Location: 50043 - 51458 (+)
Gene ID: k141_50255_46
Type: TC
Location: 51487 - 52392 (+)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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