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Cluster: AG215_69_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_50255 k141_50255_13 13216 15117 - 3.D.7.2.3
TC k141_50255 k141_50255_14 15124 16230 - 3.D.7.2.3
TC k141_50255 k141_50255_15 16549 17409 - 2.A.115.1.2
TF k141_50255 k141_50255_16 17596 18339 + HTH_DeoR
STP k141_50255 k141_50255_17 18340 19251 + PfkB
TC k141_50255 k141_50255_18 19284 21188 + 4.A.2.1.4
STP k141_50255 k141_50255_19 21551 21892 + STAS
CAZyme k141_50255 k141_50255_20 21905 24001 + GH13_11
Gene ID: k141_50255_13
Type: TC
Location: 13216 - 15117 (-)
Gene ID: k141_50255_14
Type: TC
Location: 15124 - 16230 (-)
Gene ID: k141_50255_15
Type: TC
Location: 16549 - 17409 (-)
Gene ID: k141_50255_16
Type: TF
Location: 17596 - 18339 (+)
Gene ID: k141_50255_17
Type: STP
Location: 18340 - 19251 (+)
Gene ID: k141_50255_18
Type: TC
Location: 19284 - 21188 (+)
Gene ID: k141_50255_19
Type: STP
Location: 21551 - 21892 (+)
Gene ID: k141_50255_20
Type: CAZyme
Location: 21905 - 24001 (+)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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